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Vertebrate Homology
Source
Alliance of Genome Resources

Comparative GO Graph (mouse, human, rat, zebrafish)  
Alliance Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human H2AC4 HGNC:4734 (HGNC)
8335 (Entrez Gene)
602795 (OMIM)
H2AC4 (Alliance of Genome Resources)
Chr6 p22.2 Chr6:26033092-26033618 (-)
GRCh38
P04908 (UniProt | EBI)
NM_003513 (RefSeq)
H2AC8 HGNC:4724 (HGNC)
3012 (Entrez Gene)
602786 (OMIM)
H2AC8 (Alliance of Genome Resources)
Chr6 p22.2 Chr6:26216921-26217437 (+)
GRCh38
P04908 (UniProt | EBI)
NM_021052 (RefSeq)
H2AC15 HGNC:4726 (HGNC)
8330 (Entrez Gene)
602788 (OMIM)
H2AC15 (Alliance of Genome Resources)
Chr6 p22.1 Chr6:27837880-27838375 (-)
GRCh38
P0C0S8 (UniProt | EBI)
NM_003510 (RefSeq)
mouse H2ac6 MGI:2448287 (MGI)
319164 (Entrez Gene)
Gene Tree
H2ac6 (Alliance of Genome Resources)
Chr13 9.87 cM Chr13:23867456-23867942 (-)
GRCm39
319164 (NCBI Gene Model)
C0HKE2 (UniProt | EBI)
NM_178189 (RefSeq)
rat H2ac4 RGD:1589461 (Rat Genome Database)
680615 (Entrez Gene)
H2ac4 (Alliance of Genome Resources)
Chr17 p11 NP_001102893 (RefSeq)
NM_001109423 (RefSeq)
H2ac23 RGD:1586722 (Rat Genome Database)
684773 (Entrez Gene)
H2ac23 (Alliance of Genome Resources)
Chr17 NP_001395861 (RefSeq)
NM_001408932 (RefSeq)
Hist1h2ac RGD:1597155 (Rat Genome Database)
306962 (Entrez Gene)
Hist1h2ac (Alliance of Genome Resources)
Chr17 p11 NP_001395680 (RefSeq)
NM_001408751 (RefSeq)
Hist1h2af RGD:1564767 (Rat Genome Database)
498753 (Entrez Gene)
Hist1h2af (Alliance of Genome Resources)
Chr17 p11 NP_001019453 (RefSeq)
NM_001024282 (RefSeq)
Hist1h2ai RGD:2321504 (Rat Genome Database)
100360754 (Entrez Gene)
Hist1h2ai (Alliance of Genome Resources)
Chr17 NP_001395599 (RefSeq)
NM_001408670 (RefSeq)
hist1h2ail2 RGD:1562827 (Rat Genome Database)
502129 (Entrez Gene)
hist1h2ail2 (Alliance of Genome Resources)
Chr17 p11 NP_001395690 (RefSeq)
NM_001408761 (RefSeq)
Hist1h2an RGD:1309078 (Rat Genome Database)
306970 (Entrez Gene)
Hist1h2an (Alliance of Genome Resources)
Chr17 p11 NP_001100824 (RefSeq)
NM_001107354 (RefSeq)
LOC100910554 RGD:6497956 (Rat Genome Database)
100910554 (Entrez Gene)
LOC100910554 (Alliance of Genome Resources)
Chr17 XP_003751759 (RefSeq)
zebrafish si:ch211-113a14.19 ZDB-GENE-121214-198 (Zebrafish Model Organism Database)
560527 (Entrez Gene)
si:ch211-113a14.19 (Alliance of Genome Resources)
Chr25
si:ch211-113a14.25 ZDB-GENE-121214-152 (Zebrafish Model Organism Database)
561187 (Entrez Gene)
si:ch211-113a14.25 (Alliance of Genome Resources)
Chr25 XP_009296490 (RefSeq)
si:dkey-261m9.11 ZDB-GENE-131127-102 (Zebrafish Model Organism Database)
563177 (Entrez Gene)
si:dkey-261m9.11 (Alliance of Genome Resources)
Chr25 XP_009296467 (RefSeq)
Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
11/12/2024
MGI 6.24
The Jackson Laboratory