Vertebrate Homology

• Source: Alliance of Genome Resources

Multiple Genome Viewer

Comparative GO Graph (mouse, human, rat, zebrafish)  

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences
human	JMJD1C	HGNC:12313 (HGNC) 221037 (Entrez Gene) 604503 (OMIM) JMJD1C (Alliance of Genome Resources)	Chr10 q21.3	Chr10:63167221-63521890 (-) GRCh38		Q15652 (UniProt | EBI) NM_001282948 (RefSeq)
mouse	Jmjd1c	MGI:1918614 (MGI) 108829 (Entrez Gene) Gene Tree Jmjd1c (Alliance of Genome Resources)	Chr10 34.85 cM	Chr10:66932189-67092105 (+) GRCm39		108829 (NCBI Gene Model) Q69ZK6 (UniProt | EBI) NM_001242396 (RefSeq)
rat	Jmjd1c	RGD:708458 (Rat Genome Database) 171120 (Entrez Gene) Jmjd1c (Alliance of Genome Resources)	Chr20 p11			NP_001178648 (RefSeq) NM_001191719 (RefSeq)
zebrafish	jmjd1ca	ZDB-GENE-130530-832 (Zebrafish Model Organism Database) 571586 (Entrez Gene) jmjd1ca (Alliance of Genome Resources)	Chr17			XP_021323145 (RefSeq)
	jmjd1cb	ZDB-GENE-121214-344 (Zebrafish Model Organism Database) 558436 (Entrez Gene) jmjd1cb (Alliance of Genome Resources)	Chr12			XP_009304785 (RefSeq)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.