Vertebrate Homology

• Source: Alliance of Genome Resources

Multiple Genome Viewer

 

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences
human	VCF1	HGNC:25918 (HGNC) 84923 (Entrez Gene) VCF1 (Alliance of Genome Resources)	Chr17 q25.1	Chr17:73207353-73236753 (-) GRCh38		Q969W3 (UniProt | EBI) NM_001289411 (RefSeq)
mouse	Vcf1	MGI:106351 (MGI) 28081 (Entrez Gene) Gene Tree Vcf1 (Alliance of Genome Resources)	Chr11 79.12 cM	Chr11:113552145-113574981 (-) GRCm39		ENSMUSG00000041629 (Ensembl Gene Model) ENSMUSP00000113652 (Ensembl) ENSMUST00000120194 (Ensembl)
rat	Vcf1	RGD:1563409 (Rat Genome Database) 619573 (Entrez Gene) Vcf1 (Alliance of Genome Resources)	Chr10 q32.1			NP_001030130 (RefSeq) NM_001034958 (RefSeq)
zebrafish	si:dkey-21c1.1	ZDB-GENE-130603-45 (Zebrafish Model Organism Database) 100150256 (Entrez Gene) si:dkey-21c1.1 (Alliance of Genome Resources)	Chr12			NP_001314948 (RefSeq) NM_001328019 (RefSeq)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.