Vertebrate Homology

• Source: Alliance of Genome Resources

Multiple Genome Viewer

Comparative GO Graph (mouse, human, rat, zebrafish)  

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences
human	HDX	HGNC:26411 (HGNC) 139324 (Entrez Gene) 300994 (OMIM) HDX (Alliance of Genome Resources)	ChrX q21.1	ChrX:84317874-84502479 (-) GRCh38		Q7Z353 (UniProt | EBI) NM_001177478 (RefSeq)
mouse	Hdx	MGI:2685226 (MGI) 245596 (Entrez Gene) Gene Tree Hdx (Alliance of Genome Resources)	ChrX 48.29 cM	ChrX:110484901-110606908 (-) GRCm39		245596 (NCBI Gene Model) Q14B70 (UniProt | EBI) NM_001080549 (RefSeq)
rat	Hdx	RGD:1563666 (Rat Genome Database) 317617 (Entrez Gene) Hdx (Alliance of Genome Resources)	ChrX q31			NP_001382500 (RefSeq) NM_001395571 (RefSeq)
zebrafish	hdx	ZDB-GENE-140106-165 (Zebrafish Model Organism Database) 797948 (Entrez Gene) hdx (Alliance of Genome Resources)	Chr14			NP_001189423 (RefSeq) NM_001202494 (RefSeq)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.