Vertebrate Homology

• Source: Alliance of Genome Resources

Multiple Genome Viewer

Comparative GO Graph (mouse, human, rat, zebrafish)  

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences
human	SHISA5	HGNC:30376 (HGNC) 51246 (Entrez Gene) 607290 (OMIM) SHISA5 (Alliance of Genome Resources)	Chr3 p21.31	Chr3:48467798-48504826 (-) GRCh38		Q8N114 (UniProt | EBI) NM_001272067 (RefSeq)
mouse	Shisa5	MGI:1915044 (MGI) 66940 (Entrez Gene) Gene Tree Shisa5 (Alliance of Genome Resources)	Chr9 59.63 cM	Chr9:108867633-108886845 (+) GRCm39		ENSMUSG00000025647 (Ensembl Gene Model) ENSMUSP00000107690 (Ensembl) ENSMUST00000112059 (Ensembl)
rat	Shisa5	RGD:1359661 (Rat Genome Database) 301013 (Entrez Gene) Shisa5 (Alliance of Genome Resources)	Chr8 q32			Q5XIH2 (UniProt | EBI) NM_001006989 (RefSeq)
zebrafish	shisa10.1	ZDB-GENE-030131-6596 (Zebrafish Model Organism Database) 558619 (Entrez Gene) shisa10.1 (Alliance of Genome Resources)	Chr22			NP_001038335 (RefSeq) NM_001044870 (RefSeq)
	shisa10.2	ZDB-GENE-050208-731 (Zebrafish Model Organism Database) 558681 (Entrez Gene) shisa10.2 (Alliance of Genome Resources)	Chr22			NP_001122168 (RefSeq) NM_001128696 (RefSeq)
	shisa10.4	ZDB-GENE-050208-412 (Zebrafish Model Organism Database) 558811 (Entrez Gene) shisa10.4 (Alliance of Genome Resources)	Chr22			XP_021325243 (RefSeq)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.