Vertebrate Homology

• Source: Alliance of Genome Resources

Multiple Genome Viewer

 

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences
human	TRAV12-3	HGNC:12107 (HGNC) 28672 (Entrez Gene) TRAV12-3 (Alliance of Genome Resources)	Chr14 q11.2	Chr14:21965451-21966061 (+) GRCh38		A0A0B4J271 (UniProt | EBI)
mouse	Trav7d-3	MGI:3649861 (MGI) 100042419 (Entrez Gene) Gene Tree Trav7d-3 (Alliance of Genome Resources)	Chr14 27.07 cM	Chr14:52981771-52982295 (+) GRCm39		100042419 (NCBI Gene Model) Q5R1I1 (UniProt | EBI)
rat	Trav12-3	RGD:1564212 (Rat Genome Database) 691058 (Entrez Gene) Trav12-3 (Alliance of Genome Resources)	Chr15			NP_001395540 (RefSeq) NM_001408611 (RefSeq)
zebrafish	tradv1	ZDB-GENE-170601-119 (Zebrafish Model Organism Database) 368966 (Entrez Gene) tradv1 (Alliance of Genome Resources)	Chr2
	tradv14.0	ZDB-GENE-170601-152 (Zebrafish Model Organism Database) 368554 (Entrez Gene) tradv14.0 (Alliance of Genome Resources)	Chr2
	tradv24.0.2	ZDB-GENE-141212-67 (Zebrafish Model Organism Database) 368541 (Entrez Gene) tradv24.0.2 (Alliance of Genome Resources)	Chr2
	tradv24.0.3	ZDB-GENE-141212-49 (Zebrafish Model Organism Database) 368538 (Entrez Gene) tradv24.0.3 (Alliance of Genome Resources)	Chr2
	tradv24.0.4	ZDB-GENE-141212-44 (Zebrafish Model Organism Database) 368447 (Entrez Gene) tradv24.0.4 (Alliance of Genome Resources)	Chr2
	tradv24.0.5	ZDB-GENE-141212-35 (Zebrafish Model Organism Database) 368445 (Entrez Gene) tradv24.0.5 (Alliance of Genome Resources)	Chr2

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.