Vertebrate Homology

• Source: Alliance of Genome Resources

Multiple Genome Viewer

Comparative GO Graph (mouse, human, rat, zebrafish)  

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences
human	SPINDOC	HGNC:25115 (HGNC) 144097 (Entrez Gene) SPINDOC (Alliance of Genome Resources)	Chr11 q13.1	Chr11:63813456-63827716 (+) GRCh38		Q9BUA3 (UniProt | EBI) NM_138471 (RefSeq)
mouse	Spindoc	MGI:2147611 (MGI) 68229 (Entrez Gene) Gene Tree Spindoc (Alliance of Genome Resources)	Chr19 5.32 cM	Chr19:7331443-7360359 (-) GRCm39		ENSMUSG00000024970 (Ensembl Gene Model) ENSMUSP00000025924 (Ensembl) ENSMUST00000025924 (Ensembl)
rat	Spindoc	RGD:1308106 (Rat Genome Database) 361719 (Entrez Gene) Spindoc (Alliance of Genome Resources)	Chr1 q43			NP_001386609 (RefSeq) NM_001399680 (RefSeq)
zebrafish	si:dkey-28a3.2	ZDB-GENE-141216-60 (Zebrafish Model Organism Database) 101884625 (Entrez Gene) si:dkey-28a3.2 (Alliance of Genome Resources)	Chr7			XP_009301277 (RefSeq)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.