Vertebrate Homology

• Source: Alliance of Genome Resources

Multiple Genome Viewer

Comparative GO Graph (mouse, human, rat, zebrafish)  

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences
human	RARA	HGNC:9864 (HGNC) 5914 (Entrez Gene) 180240 (OMIM) RARA (Alliance of Genome Resources)	Chr17 q21.2	Chr17:40309180-40357643 (+) GRCh38	acute promyelocytic leukemia	P10276 (UniProt | EBI) NM_001145302 (RefSeq)
mouse	Rara	MGI:97856 (MGI) 19401 (Entrez Gene) Gene Tree Rara (Alliance of Genome Resources)	Chr11 62.76 cM	Chr11:98818644-98865768 (+) GRCm39		ENSMUSG00000037992 (Ensembl Gene Model) ENSMUSP00000103098 (Ensembl) ENSMUST00000107474 (Ensembl)
rat	Rara	RGD:3534 (Rat Genome Database) 24705 (Entrez Gene) Rara (Alliance of Genome Resources)	Chr10 q31			NP_001416906 (RefSeq) NM_031528 (RefSeq)
zebrafish	raraa	ZDB-GENE-980526-284 (Zebrafish Model Organism Database) 30680 (Entrez Gene) raraa (Alliance of Genome Resources)	Chr12			Q90271 (UniProt | EBI) NM_131406 (RefSeq)
	rarab	ZDB-GENE-980526-72 (Zebrafish Model Organism Database) 555364 (Entrez Gene) rarab (Alliance of Genome Resources)	Chr3			Q7ZTI3 (UniProt | EBI) NM_131399 (RefSeq)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.