Vertebrate Homology

• Source: Alliance of Genome Resources

Multiple Genome Viewer

Comparative GO Graph (mouse, human, rat, zebrafish)  

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences
human	HOXB1	HGNC:5111 (HGNC) 3211 (Entrez Gene) 142968 (OMIM) HOXB1 (Alliance of Genome Resources)	Chr17 q21.32	Chr17:48528526-48531011 (-) GRCh38		P14653 (UniProt | EBI) NM_002144 (RefSeq)
mouse	Hoxb1	MGI:96182 (MGI) 15407 (Entrez Gene) Gene Tree Hoxb1 (Alliance of Genome Resources)	Chr11 59.86 cM	Chr11:96256578-96259082 (+) GRCm39		ENSMUSG00000018973 (Ensembl Gene Model) ENSMUSP00000019117 (Ensembl) ENSMUST00000019117 (Ensembl)
rat	Hoxb1	RGD:1310298 (Rat Genome Database) 303491 (Entrez Gene) Hoxb1 (Alliance of Genome Resources)	Chr10 q26			NP_001094022 (RefSeq) NM_001100552 (RefSeq)
zebrafish	hoxb1a	ZDB-GENE-990415-101 (Zebrafish Model Organism Database) 30337 (Entrez Gene) hoxb1a (Alliance of Genome Resources)	Chr3			O42366 (UniProt | EBI) NM_131115 (RefSeq)
	hoxb1b	ZDB-GENE-980526-290 (Zebrafish Model Organism Database) 30374 (Entrez Gene) hoxb1b (Alliance of Genome Resources)	Chr12			Q90423 (UniProt | EBI) NM_131142 (RefSeq)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.