Vertebrate Homology

• Source: Alliance of Genome Resources

Multiple Genome Viewer

Comparative GO Graph (mouse, human, rat, zebrafish)  

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences
human	CDX4	HGNC:1808 (HGNC) 1046 (Entrez Gene) 300025 (OMIM) CDX4 (Alliance of Genome Resources)	ChrX q13.2	ChrX:73447053-73455171 (+) GRCh38		O14627 (UniProt | EBI) NM_005193 (RefSeq)
mouse	Cdx4	MGI:88362 (MGI) 12592 (Entrez Gene) Gene Tree Cdx4 (Alliance of Genome Resources)	ChrX 46.06 cM	ChrX:102365004-102373830 (+) GRCm39		12592 (NCBI Gene Model) Q07424 (UniProt | EBI) NM_007674 (RefSeq)
rat	Cdx4	RGD:1561529 (Rat Genome Database) 302400 (Entrez Gene) Cdx4 (Alliance of Genome Resources)	ChrX q22			NP_001100412 (RefSeq) NM_001106942 (RefSeq)
zebrafish	cdx4	ZDB-GENE-980526-330 (Zebrafish Model Organism Database) 798281 (Entrez Gene) cdx4 (Alliance of Genome Resources)	Chr14			NP_571184 (RefSeq) NM_131109 (RefSeq)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.