Vertebrate Homology

• Source: Alliance of Genome Resources

Multiple Genome Viewer

Comparative GO Graph (mouse, human, rat, zebrafish)  

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences
human	LHX5	HGNC:14216 (HGNC) 64211 (Entrez Gene) 605992 (OMIM) LHX5 (Alliance of Genome Resources)	Chr12 q24.13	Chr12:113462033-113472280 (-) GRCh38		Q9H2C1 (UniProt | EBI) NM_022363 (RefSeq)
mouse	Lhx5	MGI:107792 (MGI) 16873 (Entrez Gene) Gene Tree Lhx5 (Alliance of Genome Resources)	Chr5 60.62 cM	Chr5:120569764-120579288 (+) GRCm39		ENSMUSG00000029595 (Ensembl Gene Model) ENSMUSP00000031591 (Ensembl) ENSMUST00000031591 (Ensembl)
rat	Lhx5	RGD:71079 (Rat Genome Database) 124451 (Entrez Gene) Lhx5 (Alliance of Genome Resources)	Chr12 q16			P61376 (UniProt | EBI) NM_139036 (RefSeq)
zebrafish	lhx5	ZDB-GENE-980526-484 (Zebrafish Model Organism Database) 30465 (Entrez Gene) lhx5 (Alliance of Genome Resources)	Chr21			P52889 (UniProt | EBI) NM_131218 (RefSeq)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.