Vertebrate Homology

• Source: Alliance of Genome Resources

Multiple Genome Viewer

Comparative GO Graph (mouse, human, rat, zebrafish)  

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences
human	LDB2	HGNC:6533 (HGNC) 9079 (Entrez Gene) 603450 (OMIM) LDB2 (Alliance of Genome Resources)	Chr4 p15.32	Chr4:16501541-16898678 (-) GRCh38		O43679 (UniProt | EBI) NM_001290 (RefSeq)
mouse	Ldb2	MGI:894670 (MGI) 16826 (Entrez Gene) Gene Tree Ldb2 (Alliance of Genome Resources)	Chr5 24.24 cM	Chr5:44629474-44957022 (-) GRCm39		ENSMUSG00000039706 (Ensembl Gene Model) ENSMUSP00000067737 (Ensembl) ENSMUST00000070748 (Ensembl)
rat	Ldb2	RGD:1307921 (Rat Genome Database) 289664 (Entrez Gene) Ldb2 (Alliance of Genome Resources)	Chr14 q21			NP_001099479 (RefSeq) NM_001106009 (RefSeq)
zebrafish	ldb2a	ZDB-GENE-990415-136 (Zebrafish Model Organism Database) 30577 (Entrez Gene) ldb2a (Alliance of Genome Resources)	Chr14			NP_571389 (RefSeq) NM_131314 (RefSeq)
	ldb2b	ZDB-GENE-990415-137 (Zebrafish Model Organism Database) 30578 (Entrez Gene) ldb2b (Alliance of Genome Resources)	Chr1			NP_571390 (RefSeq) NM_131315 (RefSeq)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.