Vertebrate Homology

• Source: Alliance of Genome Resources

Multiple Genome Viewer

Comparative GO Graph (mouse, human, rat, zebrafish)  

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences
human	RAX	HGNC:18662 (HGNC) 30062 (Entrez Gene) 601881 (OMIM) RAX (Alliance of Genome Resources)	Chr18 q21.32	Chr18:59267035-59274086 (-) GRCh38	isolated microphthalmia 3	Q9Y2V3 (UniProt | EBI) NM_013435 (RefSeq)
mouse	Rax	MGI:109632 (MGI) 19434 (Entrez Gene) Gene Tree Rax (Alliance of Genome Resources)	Chr18 39.03 cM	Chr18:66067710-66072160 (-) GRCm39		19434 (NCBI Gene Model) O35602 (UniProt | EBI) NM_013833 (RefSeq)
rat	Rax	RGD:620371 (Rat Genome Database) 114213 (Entrez Gene) Rax (Alliance of Genome Resources)	Chr18 q12.1			Q9JLT7 (UniProt | EBI) NM_053678 (RefSeq)
zebrafish	rx1	ZDB-GENE-990415-236 (Zebrafish Model Organism Database) 30472 (Entrez Gene) rx1 (Alliance of Genome Resources)	Chr22			O42356 (UniProt | EBI) NM_131225 (RefSeq)
	rx2	ZDB-GENE-990415-237 (Zebrafish Model Organism Database) 30473 (Entrez Gene) rx2 (Alliance of Genome Resources)	Chr2			O42357 (UniProt | EBI) NM_131226 (RefSeq)
	rx3	ZDB-GENE-990415-238 (Zebrafish Model Organism Database) 30474 (Entrez Gene) rx3 (Alliance of Genome Resources)	Chr21			O42358 (UniProt | EBI) NM_131227 (RefSeq)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.