Vertebrate Homology

• Source: Alliance of Genome Resources

Multiple Genome Viewer

Comparative GO Graph (mouse, human, rat, zebrafish)  

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences
human	UPF1	HGNC:9962 (HGNC) 5976 (Entrez Gene) 601430 (OMIM) UPF1 (Alliance of Genome Resources)	Chr19 p13.11	Chr19:18831959-18868230 (+) GRCh38		Q92900 (UniProt | EBI) NM_002911 (RefSeq)
mouse	Upf1	MGI:107995 (MGI) 19704 (Entrez Gene) Gene Tree Upf1 (Alliance of Genome Resources)	Chr8 34.15 cM	Chr8:70784175-70805928 (-) GRCm39		ENSMUSG00000058301 (Ensembl Gene Model) ENSMUSP00000075089 (Ensembl) ENSMUST00000075666 (Ensembl)
rat	Upf1	RGD:1589127 (Rat Genome Database) 684558 (Entrez Gene) Upf1 (Alliance of Genome Resources)	Chr16			NP_001414288 (RefSeq) NM_001427359 (RefSeq)
zebrafish	upf1	ZDB-GENE-040426-2836 (Zebrafish Model Organism Database) 406783 (Entrez Gene) upf1 (Alliance of Genome Resources)	Chr2			F1RCY6 (UniProt | EBI) NM_213474 (RefSeq)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.