Vertebrate Homology

• Source: Alliance of Genome Resources

Multiple Genome Viewer

Comparative GO Graph (mouse, human, rat, zebrafish)  

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences
human	PGAP3	HGNC:23719 (HGNC) 93210 (Entrez Gene) 611801 (OMIM) PGAP3 (Alliance of Genome Resources)	Chr17 q12	Chr17:39671122-39696797 (-) GRCh38	hyperphosphatasia with impaired intellectual development syndrome 4	Q96FM1 (UniProt | EBI) NM_001291726 (RefSeq)
mouse	Pgap3	MGI:2444461 (MGI) 320655 (Entrez Gene) Gene Tree Pgap3 (Alliance of Genome Resources)	Chr11 61.75 cM	Chr11:98279503-98291316 (-) GRCm39		ENSMUSG00000038208 (Ensembl Gene Model) ENSMUSP00000088337 (Ensembl) ENSMUST00000090827 (Ensembl)
rat	Pgap3	RGD:1592386 (Rat Genome Database) 688174 (Entrez Gene) Pgap3 (Alliance of Genome Resources)	Chr10			NP_001137367 (RefSeq) NM_001143895 (RefSeq)
zebrafish	pgap3	ZDB-GENE-080204-27 (Zebrafish Model Organism Database) 100136873 (Entrez Gene) pgap3 (Alliance of Genome Resources)	Chr12			A8WFS8 (UniProt | EBI) NM_001114591 (RefSeq)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.