Vertebrate Homology

• Source: Alliance of Genome Resources

Multiple Genome Viewer

Comparative GO Graph (mouse, human, rat, zebrafish)  

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences
human	CCN1	HGNC:2654 (HGNC) 3491 (Entrez Gene) 602369 (OMIM) CCN1 (Alliance of Genome Resources)	Chr1 p22.3	Chr1:85580761-85584589 (+) GRCh38	high grade glioma	O00622 (UniProt | EBI) NM_001554 (RefSeq)
mouse	Ccn1	MGI:88613 (MGI) 16007 (Entrez Gene) Gene Tree Ccn1 (Alliance of Genome Resources)	Chr3 70.18 cM	Chr3:145352731-145355736 (-) GRCm39	atrial heart septal defect 1 atrioventricular septal defect	ENSMUSG00000028195 (Ensembl Gene Model) ENSMUSP00000029846 (Ensembl) ENSMUST00000029846 (Ensembl)
rat	Ccn1	RGD:620763 (Rat Genome Database) 83476 (Entrez Gene) Ccn1 (Alliance of Genome Resources)	Chr2 q44			Q9ES72 (UniProt | EBI) NM_031327 (RefSeq)
zebrafish	ccn1	ZDB-GENE-040426-3 (Zebrafish Model Organism Database) 403033 (Entrez Gene) ccn1 (Alliance of Genome Resources)	Chr23			NP_001001826 (RefSeq) NM_001001826 (RefSeq)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.