Vertebrate Homology

• Source: Alliance of Genome Resources

Multiple Genome Viewer

Comparative GO Graph (mouse, human, rat, zebrafish)  

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences
human	SV2C	HGNC:30670 (HGNC) 22987 (Entrez Gene) 610291 (OMIM) SV2C (Alliance of Genome Resources)	Chr5 q13.3	Chr5:75847464-76353939 (+) GRCh38		Q496J9 (UniProt | EBI) NM_001297716 (RefSeq)
mouse	Sv2c	MGI:1922459 (MGI) 75209 (Entrez Gene) Gene Tree Sv2c (Alliance of Genome Resources)	Chr13 50.47 cM	Chr13:96091102-96269085 (-) GRCm39		ENSMUSG00000051111 (Ensembl Gene Model) ENSMUSP00000124473 (Ensembl) ENSMUST00000161263 (Ensembl)
rat	Sv2c	RGD:619718 (Rat Genome Database) 29643 (Entrez Gene) Sv2c (Alliance of Genome Resources)	Chr2 q12			Q9Z2I6 (UniProt | EBI) NM_031593 (RefSeq)
zebrafish	sv2ca	ZDB-GENE-060526-233 (Zebrafish Model Organism Database) 562345 (Entrez Gene) sv2ca (Alliance of Genome Resources)	Chr5			NP_001121811 (RefSeq) NM_001128339 (RefSeq)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.