Vertebrate Homology

• Source: Alliance of Genome Resources

Multiple Genome Viewer

Comparative GO Graph (mouse, human, rat, zebrafish)  

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences
human	SLC52A1	HGNC:30225 (HGNC) 55065 (Entrez Gene) 607883 (OMIM) SLC52A1 (Alliance of Genome Resources)	Chr17 p13.2	Chr17:5032600-5052009 (-) GRCh38	riboflavin deficiency	Q9NWF4 (UniProt | EBI) NM_017986 (RefSeq)
	SLC52A2	HGNC:30224 (HGNC) 79581 (Entrez Gene) 607882 (OMIM) SLC52A2 (Alliance of Genome Resources)	Chr8 q24.3	Chr8:144333957-144361286 (+) GRCh38	Brown-Vialetto-Van Laere syndrome 2	Q9HAB3 (UniProt | EBI) NM_001363118 (RefSeq)
mouse	Slc52a2	MGI:1289288 (MGI) 52710 (Entrez Gene) Gene Tree Slc52a2 (Alliance of Genome Resources)	Chr15 36.04 cM	Chr15:76423032-76428808 (+) GRCm39		ENSMUSG00000022560 (Ensembl Gene Model) ENSMUSP00000023220 (Ensembl) ENSMUST00000023220 (Ensembl)
rat	Slc52a2	RGD:1560410 (Rat Genome Database) 362942 (Entrez Gene) Slc52a2 (Alliance of Genome Resources)	Chr7 q34			B5MEV3 (UniProt | EBI) NM_001109670 (RefSeq)
zebrafish	slc52a2	ZDB-GENE-030131-2552 (Zebrafish Model Organism Database) 323832 (Entrez Gene) slc52a2 (Alliance of Genome Resources)	Chr19			NP_955950 (RefSeq) NM_199656 (RefSeq)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.