Vertebrate Homology

• Source: Alliance of Genome Resources

Multiple Genome Viewer

Comparative GO Graph (mouse, human, rat, zebrafish)  

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences
human	SPOPL	HGNC:27934 (HGNC) 339745 (Entrez Gene) SPOPL (Alliance of Genome Resources)	Chr2 q22.1	Chr2:138501770-138573547 (+) GRCh38		Q6IQ16 (UniProt | EBI) NM_001001664 (RefSeq)
mouse	Spopl	MGI:1924107 (MGI) 76857 (Entrez Gene) Gene Tree Spopl (Alliance of Genome Resources)	Chr2 15.48 cM	Chr2:23396232-23462118 (-) GRCm39		ENSMUSG00000026771 (Ensembl Gene Model) ENSMUSP00000114974 (Ensembl) ENSMUST00000132484 (Ensembl)
rat	Spopl	RGD:1305847 (Rat Genome Database) 296532 (Entrez Gene) Spopl (Alliance of Genome Resources)	Chr3 p13			NP_001418500 (RefSeq) NM_001431570 (RefSeq)
zebrafish	spopla	ZDB-GENE-050320-3 (Zebrafish Model Organism Database) 541318 (Entrez Gene) spopla (Alliance of Genome Resources)	Chr9			Q5BL35 (UniProt | EBI) NM_001013447 (RefSeq)
	spoplb	ZDB-GENE-061103-277 (Zebrafish Model Organism Database) 558170 (Entrez Gene) spoplb (Alliance of Genome Resources)	Chr11			A0JMG1 (UniProt | EBI) NM_001079969 (RefSeq)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.