Vertebrate Homology

• Source: Alliance of Genome Resources

Multiple Genome Viewer

 

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences
human	TRAPPC2	HGNC:23068 (HGNC) 6399 (Entrez Gene) 300202 (OMIM) TRAPPC2 (Alliance of Genome Resources)	ChrX p22.2	ChrX:13712244-13734635 (-) GRCh38	X-linked spondyloepiphyseal dysplasia tarda	P0DI81 (UniProt | EBI) NM_001128835 (RefSeq)
	TRAPPC2B	HGNC:10710 (HGNC) 10597 (Entrez Gene) 620472 (OMIM) TRAPPC2B (Alliance of Genome Resources)	Chr19 q13.43	Chr19:57363551-57365405 (+) GRCh38		P0DI82 (UniProt | EBI) NM_001355204 (RefSeq)
mouse	Trappc2b	MGI:1913300 (MGI) 66050 (Entrez Gene) Gene Tree Trappc2b (Alliance of Genome Resources)	Chr11 31.26 cM	Chr11:51576213-51579701 (-) GRCm39		ENSMUSG00000007777 (Ensembl Gene Model) ENSMUSP00000007921 (Ensembl) ENSMUST00000007921 (Ensembl)
rat	Trappc2	RGD:1306925 (Rat Genome Database) 501550 (Entrez Gene) Trappc2 (Alliance of Genome Resources)	ChrX q13			NP_001020136 (RefSeq) NM_001024965 (RefSeq)
	Trappc2b	RGD:6499350 (Rat Genome Database) 100910318 (Entrez Gene) Trappc2b (Alliance of Genome Resources)	Chr10			D3ZVF4 (UniProt | EBI) NM_001271112 (RefSeq)
zebrafish	trappc2	ZDB-GENE-060929-1266 (Zebrafish Model Organism Database) 767808 (Entrez Gene) trappc2 (Alliance of Genome Resources)	Chr9			Q08CN0 (UniProt | EBI) NM_001076775 (RefSeq)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.