Vertebrate Homology

• Source: Alliance of Genome Resources

Multiple Genome Viewer

Comparative GO Graph (mouse, human, rat, zebrafish)  

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences
human	SGMS1	HGNC:29799 (HGNC) 259230 (Entrez Gene) 611573 (OMIM) SGMS1 (Alliance of Genome Resources)	Chr10 q11.23	Chr10:50305586-50625184 (-) GRCh38		Q86VZ5 (UniProt | EBI) NM_147156 (RefSeq)
mouse	Sgms1	MGI:2444110 (MGI) 208449 (Entrez Gene) Gene Tree Sgms1 (Alliance of Genome Resources)	Chr19 26.68 cM	Chr19:32100127-32367114 (-) GRCm39		ENSMUSG00000040451 (Ensembl Gene Model) ENSMUSP00000097114 (Ensembl) ENSMUST00000099514 (Ensembl)
rat	Sgms1	RGD:727912 (Rat Genome Database) 353229 (Entrez Gene) Sgms1 (Alliance of Genome Resources)	Chr1 q52			Q7TSX5 (UniProt | EBI) NM_181386 (RefSeq)
zebrafish	sgms1a	ZDB-GENE-041114-201 (Zebrafish Model Organism Database) 492359 (Entrez Gene) sgms1a (Alliance of Genome Resources)	Chr17			NP_001007326 (RefSeq) NM_001007325 (RefSeq)
	sgms1b	ZDB-GENE-061103-295 (Zebrafish Model Organism Database) 566563 (Entrez Gene) sgms1b (Alliance of Genome Resources)	Chr12			NP_001071082 (RefSeq) NM_001077614 (RefSeq)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.