Vertebrate Homology

• Source: Alliance of Genome Resources

Multiple Genome Viewer

 

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences
human	BMAL1	HGNC:701 (HGNC) 406 (Entrez Gene) 602550 (OMIM) BMAL1 (Alliance of Genome Resources)	Chr11 p15.3	Chr11:13276652-13387266 (+) GRCh38	alcohol dependence bipolar disorder	O00327 (UniProt | EBI) NM_001030272 (RefSeq)
mouse	Bmal1	MGI:1096381 (MGI) 11865 (Entrez Gene) Gene Tree Bmal1 (Alliance of Genome Resources)	Chr7 59.17 cM	Chr7:112806672-112913333 (+) GRCm39	diabetes mellitus	ENSMUSG00000055116 (Ensembl Gene Model) ENSMUSP00000147823 (Ensembl) ENSMUST00000211770 (Ensembl)
rat	Bmal1	RGD:62003 (Rat Genome Database) 29657 (Entrez Gene) Bmal1 (Alliance of Genome Resources)	Chr1 q33			Q9EPW1 (UniProt | EBI) NM_024362 (RefSeq)
zebrafish	bmal1a	ZDB-GENE-000509-1 (Zebrafish Model Organism Database) 58098 (Entrez Gene) bmal1a (Alliance of Genome Resources)	Chr25			NP_571652 (RefSeq) NM_131577 (RefSeq)
	bmal1b	ZDB-GENE-030408-1 (Zebrafish Model Organism Database) 352935 (Entrez Gene) bmal1b (Alliance of Genome Resources)	Chr7			NP_840085 (RefSeq) NM_178300 (RefSeq)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.