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Vertebrate Homology
Source
Alliance of Genome Resources

 
Alliance Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human TMT1A HGNC:24550 (HGNC)
25840 (Entrez Gene)
618338 (OMIM)
TMT1A (Alliance of Genome Resources)
Chr12 q13.12 Chr12:50923472-50932510 (+)
GRCh38
Q9H8H3 (UniProt | EBI)
NM_014033 (RefSeq)
mouse Tmt1a3 MGI:3710670 (MGI)
668178 (Entrez Gene)
Gene Tree
Tmt1a3 (Alliance of Genome Resources)
Chr15 56.27 cM Chr15:100232810-100238256 (+)
GRCm39
ENSMUSG00000058057 (Ensembl Gene Model)
ENSMUSP00000074875 (Ensembl)
ENSMUST00000075420 (Ensembl)
rat Tmt1a RGD:1308407 (Rat Genome Database)
315306 (Entrez Gene)
Tmt1a (Alliance of Genome Resources)
Chr7 q36 NP_001032432 (RefSeq)
NM_001037355 (RefSeq)
zebrafish tmt1a.1 ZDB-GENE-061027-239 (Zebrafish Model Organism Database)
569131 (Entrez Gene)
tmt1a.1 (Alliance of Genome Resources)
Chr6 NP_001073508 (RefSeq)
NM_001080039 (RefSeq)
tmt1a.2 ZDB-GENE-120215-62 (Zebrafish Model Organism Database)
569089 (Entrez Gene)
tmt1a.2 (Alliance of Genome Resources)
Chr6 XP_021327508 (RefSeq)
tmt1a.3 ZDB-GENE-120215-64 (Zebrafish Model Organism Database)
569046 (Entrez Gene)
tmt1a.3 (Alliance of Genome Resources)
Chr6 NP_001373576 (RefSeq)
NM_001386647 (RefSeq)
Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
11/12/2024
MGI 6.24
The Jackson Laboratory