Vertebrate Homology

• Source: Alliance of Genome Resources

Multiple Genome Viewer

 

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences
mouse	1700109H08Rik	MGI:1924286 (MGI) 77036 (Entrez Gene) Gene Tree 1700109H08Rik (Alliance of Genome Resources)	Chr5 2.24 cM	Chr5:3621716-3634341 (+) GRCm39		77036 (NCBI Gene Model) NP_084119 (RefSeq) NM_029843 (RefSeq)
rat	1700109H08Rikl	RGD:1588445 (Rat Genome Database) 500007 (Entrez Gene) 1700109H08Rikl (Alliance of Genome Resources)	Chr4 q13			XP_006236139 (RefSeq)
zebrafish	clxn	ZDB-GENE-040914-40 (Zebrafish Model Organism Database) 558421 (Entrez Gene) clxn (Alliance of Genome Resources)	Chr19			Q1LWZ0 (UniProt | EBI) NM_001044860 (RefSeq)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.