Vertebrate Homology

• Source: Alliance of Genome Resources

Multiple Genome Viewer

Comparative GO Graph (mouse, human)  

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences
human	IGKV1-8	HGNC:5743 (HGNC) 28942 (Entrez Gene) IGKV1-8 (Alliance of Genome Resources)	Chr2 p11.2	Chr2:88992409-88992931 (-) GRCh38		A0A0C4DH67 (UniProt | EBI)
	IGKV1-13	HGNC:5731 (HGNC) 28939 (Entrez Gene) IGKV1-13 (Alliance of Genome Resources)	Chr2 p11.2	Chr2:89045990-89046466 (-) GRCh38		P0DP09 (UniProt | EBI)
	IGKV1-27	HGNC:5735 (HGNC) 28935 (Entrez Gene) IGKV1-27 (Alliance of Genome Resources)	Chr2 p11.2	Chr2:89213423-89213928 (-) GRCh38		A0A075B6S5 (UniProt | EBI)
	IGKV1-33	HGNC:5737 (HGNC) 28933 (Entrez Gene) IGKV1-33 (Alliance of Genome Resources)	Chr2 p11.2	Chr2:89268001-89268506 (-) GRCh38
	IGKV1-39	HGNC:5740 (HGNC) 28930 (Entrez Gene) IGKV1-39 (Alliance of Genome Resources)	Chr2 p11.2	Chr2:89319625-89320146 (-) GRCh38		P01597 (UniProt | EBI)
	IGKV1D-8	HGNC:5759 (HGNC) 28904 (Entrez Gene) IGKV1D-8 (Alliance of Genome Resources)	Chr2 p11.2	Chr2:90220727-90221384 (+) GRCh38		A0A087WSZ0 (UniProt | EBI)
	IGKV1D-13	HGNC:5747 (HGNC) 28902 (Entrez Gene) IGKV1D-13 (Alliance of Genome Resources)	Chr2 p11.2	Chr2:90154073-90154574 (+) GRCh38		A0A0B4J2D9 (UniProt | EBI)
	IGKV1D-33	HGNC:5753 (HGNC) 28896 (Entrez Gene) IGKV1D-33 (Alliance of Genome Resources)	Chr2 p11.2	Chr2:89913982-89914545 (+) GRCh38		P01593 (UniProt | EBI)
	IGKV1D-43	HGNC:5758 (HGNC) 28891 (Entrez Gene) IGKV1D-43 (Alliance of Genome Resources)	Chr2 p11.2	Chr2:90209873-90210529 (+) GRCh38		A0A0B4J1Z2 (UniProt | EBI)
	IGKV1OR2-108	HGNC:5767 (HGNC) 28862 (Entrez Gene) 147185 (OMIM) IGKV1OR2-108 (Alliance of Genome Resources)	Chr2 q12-q14	Chr2:113406396-113406872 (+) GRCh38
mouse	Igkv12-38	MGI:4439614 (MGI) 620050 (Entrez Gene) Gene Tree Igkv12-38 (Alliance of Genome Resources)	Chr6 31.69 cM	Chr6:69920170-69920632 (-) GRCm39		620050 (NCBI Gene Model) A0A0G2JEI7 (UniProt | EBI)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.