Vertebrate Homology

• Source: Alliance of Genome Resources

Multiple Genome Viewer

Comparative GO Graph (mouse, human, rat)  

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences
human	PRAMEF1	HGNC:28840 (HGNC) 65121 (Entrez Gene) PRAMEF1 (Alliance of Genome Resources)	Chr1 p36.21	Chr1:12791397-12796628 (+) GRCh38		O95521 (UniProt | EBI) NM_001294139 (RefSeq)
	PRAMEF2	HGNC:28841 (HGNC) 65122 (Entrez Gene) PRAMEF2 (Alliance of Genome Resources)	Chr1 p36.21	Chr1:12857086-12861909 (+) GRCh38		O60811 (UniProt | EBI) NM_023014 (RefSeq)
	PRAMEF4	HGNC:31971 (HGNC) 400735 (Entrez Gene) PRAMEF4 (Alliance of Genome Resources)	Chr1 p36.21	Chr1:12879212-12886201 (-) GRCh38		O60810 (UniProt | EBI) NM_001009611 (RefSeq)
	PRAMEF5	HGNC:27995 (HGNC) 343068 (Entrez Gene) PRAMEF5 (Alliance of Genome Resources)	Chr1 p36.21	Chr1:13254198-13263435 (+) GRCh38		Q5TYX0 (UniProt | EBI) NM_001013407 (RefSeq)
	PRAMEF6	HGNC:30583 (HGNC) 440561 (Entrez Gene) PRAMEF6 (Alliance of Genome Resources)	Chr1 p36.21	Chr1:12938472-12947580 (-) GRCh38		Q5VXH4 (UniProt | EBI) NM_001010889 (RefSeq)
	PRAMEF7	HGNC:28415 (HGNC) 441871 (Entrez Gene) PRAMEF7 (Alliance of Genome Resources)	Chr1 p36.21	Chr1:12916610-12920751 (+) GRCh38		Q5VXH5 (UniProt | EBI) NM_001012277 (RefSeq)
	PRAMEF8	HGNC:24074 (HGNC) 391002 (Entrez Gene) PRAMEF8 (Alliance of Genome Resources)	Chr1 p36.21	Chr1:13281304-13285137 (-) GRCh38		Q5VWM4 (UniProt | EBI) NM_001012276 (RefSeq)
	PRAMEF9	HGNC:27996 (HGNC) 343070 (Entrez Gene) PRAMEF9 (Alliance of Genome Resources)	Chr1 p36.21	Chr1:13171848-13179459 (+) GRCh38		P0DUQ2 (UniProt | EBI) NM_001010890 (RefSeq)
	PRAMEF10	HGNC:27997 (HGNC) 343071 (Entrez Gene) PRAMEF10 (Alliance of Genome Resources)	Chr1 p36.21	Chr1:12892896-12898270 (-) GRCh38		O60809 (UniProt | EBI) NM_001039361 (RefSeq)
	PRAMEF11	HGNC:14086 (HGNC) 440560 (Entrez Gene) PRAMEF11 (Alliance of Genome Resources)	Chr1 p36.21	Chr1:12824605-12831410 (-) GRCh38		O60813 (UniProt | EBI) NM_001146344 (RefSeq)
	PRAMEF12	HGNC:22125 (HGNC) 390999 (Entrez Gene) PRAMEF12 (Alliance of Genome Resources)	Chr1 p36.21	Chr1:12773738-12777906 (+) GRCh38		O95522 (UniProt | EBI) NM_001080830 (RefSeq)
	PRAMEF13	HGNC:13262 (HGNC) 400736 (Entrez Gene) PRAMEF13 (Alliance of Genome Resources)	Chr1 p36.21	Chr1:13196188-13201409 (-) GRCh38		Q5VWM6 (UniProt | EBI) NM_001291380 (RefSeq)
	PRAMEF15	HGNC:26764 (HGNC) 653619 (Entrez Gene) PRAMEF15 (Alliance of Genome Resources)	Chr1 p36.21	Chr1:13315581-13322598 (+) GRCh38		P0DUQ1 (UniProt | EBI) NM_001098376 (RefSeq)
	PRAMEF17	HGNC:29485 (HGNC) 391004 (Entrez Gene) PRAMEF17 (Alliance of Genome Resources)	Chr1 p36.21			Q5VTA0 (UniProt | EBI) NM_001099851 (RefSeq)
	PRAMEF18	HGNC:30693 (HGNC) 391003 (Entrez Gene) PRAMEF18 (Alliance of Genome Resources)	Chr1 p36.21	Chr1:13222695-13226154 (-) GRCh38		Q5VWM3 (UniProt | EBI) NM_001099850 (RefSeq)
	PRAMEF19	HGNC:24908 (HGNC) 645414 (Entrez Gene) PRAMEF19 (Alliance of Genome Resources)	Chr1 p36.21	Chr1:13368431-13371947 (-) GRCh38		Q5SWL8 (UniProt | EBI) NM_001099790 (RefSeq)
	PRAMEF20	HGNC:25224 (HGNC) 645425 (Entrez Gene) PRAMEF20 (Alliance of Genome Resources)	Chr1 p36.21	Chr1:13410450-13421328 (+) GRCh38		Q5VT98 (UniProt | EBI) NM_001099852 (RefSeq)
	PRAMEF25	HGNC:49179 (HGNC) 441873 (Entrez Gene) PRAMEF25 (Alliance of Genome Resources)	Chr1 p36.21	Chr1:13068677-13077884 (+) GRCh38		A6NGN4 (UniProt | EBI) NM_001310134 (RefSeq)
	PRAMEF26	HGNC:49178 (HGNC) 645359 (Entrez Gene) PRAMEF26 (Alliance of Genome Resources)	Chr1 p36.21			H0Y7S4 (UniProt | EBI) NM_001306072 (RefSeq)
	PRAMEF27	HGNC:51234 (HGNC) 101929983 (Entrez Gene) PRAMEF27 (Alliance of Genome Resources)	Chr	Chr1:13049476-13056575 (-) GRCh38		A3QJZ7 (UniProt | EBI) NM_001300891 (RefSeq)
	PRAMEF33	HGNC:49193 (HGNC) 645382 (Entrez Gene) PRAMEF33 (Alliance of Genome Resources)	Chr1 p36.21	Chr1:13303539-13308907 (+) GRCh38		A0A0G2JMD5 (UniProt | EBI) NM_001291381 (RefSeq)
mouse	Pramel20	MGI:3525148 (MGI) 329986 (Entrez Gene) Gene Tree Pramel20 (Alliance of Genome Resources)	Chr4 77.78 cM	Chr4:143294045-143300368 (+) GRCm39		ENSMUSG00000070618 (Ensembl Gene Model) ENSMUSP00000101400 (Ensembl) ENSMUST00000105774 (Ensembl)
rat	Pramef25	RGD:1561813 (Rat Genome Database) 502998 (Entrez Gene) Pramef25 (Alliance of Genome Resources)	Chr5 q36			XP_056841534 (RefSeq)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.