Vertebrate Homology

• Source: Alliance of Genome Resources

Multiple Genome Viewer

Comparative GO Graph (mouse, human, rat)  

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences
human	SPDYE1	HGNC:16408 (HGNC) 285955 (Entrez Gene) 617623 (OMIM) SPDYE1 (Alliance of Genome Resources)	Chr7 p13	Chr7:43997897-44010124 (+) GRCh38		Q8NFV5 (UniProt | EBI) NM_175064 (RefSeq)
	SPDYE4	HGNC:35463 (HGNC) 388333 (Entrez Gene) 617628 (OMIM) SPDYE4 (Alliance of Genome Resources)	Chr17 p13.1	Chr17:8747524-8758559 (-) GRCh38		A6NLX3 (UniProt | EBI) NM_001394956 (RefSeq)
	SPDYE5	HGNC:35464 (HGNC) 442590 (Entrez Gene) SPDYE5 (Alliance of Genome Resources)	Chr	Chr7:75491630-75504316 (+) GRCh38		A6NIY4 (UniProt | EBI) NM_001099435 (RefSeq)
	SPDYE7P	HGNC:35466 (HGNC) 441251 (Entrez Gene) SPDYE7P (Alliance of Genome Resources)	Chr7 q11.23	Chr7:72861524-72873294 (-) GRCh38		Q495Y7 (UniProt | EBI) NM_001382704 (RefSeq)
	SPDYE8	HGNC:33771 (HGNC) 728524 (Entrez Gene) SPDYE8 (Alliance of Genome Resources)	Chr7 q11.23	Chr7:73019719-73029766 (-) GRCh38		P0DUD1 (UniProt | EBI) NM_001032389 (RefSeq)
	SPDYE9	HGNC:45034 (HGNC) 643909 (Entrez Gene) SPDYE9 (Alliance of Genome Resources)	Chr7 q11.23			NP_001369483 (RefSeq) NM_001382554 (RefSeq)
	SPDYE11	HGNC:51507 (HGNC) 100996746 (Entrez Gene) SPDYE11 (Alliance of Genome Resources)	Chr	Chr7:73047862-73057911 (-) GRCh38		P0DTA3 (UniProt | EBI) NM_001351349 (RefSeq)
	SPDYE13	HGNC:51509 (HGNC) 105180390 (Entrez Gene) SPDYE13 (Alliance of Genome Resources)	Chr	Chr7:75280790-75291806 (+) GRCh38		NP_001369492 (RefSeq) NM_001382563 (RefSeq)
	SPDYE14	HGNC:51510 (HGNC) 641776 (Entrez Gene) SPDYE14 (Alliance of Genome Resources)	Chr7 q11.23	Chr7:75237205-75317429 (+) GRCh38		P0DUD3 (UniProt | EBI) NM_001382494 (RefSeq)
	SPDYE21	HGNC:51517 (HGNC) 442572 (Entrez Gene) SPDYE21 (Alliance of Genome Resources)	Chr	Chr7:67276941-67289005 (+) GRCh38		A0A494C086 (UniProt | EBI) NM_001382715 (RefSeq)
mouse	Spdye4a	MGI:1921923 (MGI) 74673 (Entrez Gene) Gene Tree Spdye4a (Alliance of Genome Resources)	Chr5 82.01 cM	Chr5:143202071-143212645 (-) GRCm39		ENSMUSG00000039296 (Ensembl Gene Model) ENSMUSP00000082882 (Ensembl) ENSMUST00000085733 (Ensembl)
rat	Spdye4	RGD:1561076 (Rat Genome Database) 498146 (Entrez Gene) Spdye4 (Alliance of Genome Resources)	Chr12 p11			NP_001029325 (RefSeq) NM_001034153 (RefSeq)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.