Vertebrate Homology

• Source: Alliance of Genome Resources

Multiple Genome Viewer

 

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences
mouse	Gm21854	MGI:5434018 (MGI) 102632705 (Entrez Gene) Gene Tree Gm21854 (Alliance of Genome Resources)	ChrY Syntenic	ChrY:5656986-5659574 (+) GRCm39		ENSMUSG00000096706 (Ensembl Gene Model) ENSMUSP00000139409 (Ensembl) ENSMUST00000190391 (Ensembl)
rat	LOC100910078	RGD:6500561 (Rat Genome Database) 100910078 (Entrez Gene) LOC100910078 (Alliance of Genome Resources)	Chr11
	LOC103694730	RGD:9357395 (Rat Genome Database) 103694730 (Entrez Gene) LOC103694730 (Alliance of Genome Resources)	ChrY			XP_063136681 (RefSeq)
	LOC108353098	RGD:11387844 (Rat Genome Database) 108353098 (Entrez Gene) LOC108353098 (Alliance of Genome Resources)	Chr3			XP_063136753 (RefSeq)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.