Vertebrate Homology

• Source: Alliance of Genome Resources

Multiple Genome Viewer

 

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences
mouse	Smok2a	MGI:1351487 (MGI) 27263 (Entrez Gene) Gene Tree Smok2a (Alliance of Genome Resources)	Chr17 8.82 cM	Chr17:13440075-13446545 (+) GRCm39		ENSMUSG00000073458 (Ensembl Gene Model) ENSMUSP00000094432 (Ensembl) ENSMUST00000080647 (Ensembl)
rat	Smok2a	RGD:1565233 (Rat Genome Database) 292316 (Entrez Gene) Smok2a (Alliance of Genome Resources)	Chr1 q12			NP_001178548 (RefSeq) NM_001191619 (RefSeq)
	Smok2al1	RGD:1560718 (Rat Genome Database) 499027 (Entrez Gene) Smok2al1 (Alliance of Genome Resources)	Chr1 q12			NP_001388787 (RefSeq) NM_001401858 (RefSeq)
	Smokl5	RGD:1582875 (Rat Genome Database) 690235 (Entrez Gene) Smokl5 (Alliance of Genome Resources)	Chr8 q12			NP_001417119 (RefSeq) NM_001430190 (RefSeq)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.