Vertebrate Homology

• Source: Alliance of Genome Resources

Multiple Genome Viewer

Comparative GO Graph (mouse, human, rat, zebrafish)  

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences
human	PAX6	HGNC:8620 (HGNC) 5080 (Entrez Gene) 607108 (OMIM) PAX6 (Alliance of Genome Resources)	Chr11 p13	Chr11:31784779-31817961 (-) GRCh38	aniridia aniridia 1 anterior segment dysgenesis 5 autosomal dominant keratitis bilateral optic nerve hypoplasia cataract cataract 27 coloboma of optic nerve congenital nystagmus foveal hypoplasia 1 glucose intolerance microphthalmia paranoid schizophrenia	P26367 (UniProt | EBI) NM_001310159 (RefSeq)
mouse	Pax6	MGI:97490 (MGI) 18508 (Entrez Gene) Gene Tree Pax6 (Alliance of Genome Resources)	Chr2 55.31 cM	Chr2:105499245-105527709 (+) GRCm39	aniridia cataract juvenile glaucoma Peters anomaly	ENSMUSG00000027168 (Ensembl Gene Model) ENSMUSP00000129344 (Ensembl) ENSMUST00000167211 (Ensembl)
rat	Pax6	RGD:3258 (Rat Genome Database) 25509 (Entrez Gene) Pax6 (Alliance of Genome Resources)	Chr3 q33			P63016 (UniProt | EBI) NM_013001 (RefSeq)
zebrafish	pax6a	ZDB-GENE-990415-200 (Zebrafish Model Organism Database) 30567 (Entrez Gene) pax6a (Alliance of Genome Resources)	Chr25			P26630 (UniProt | EBI) NM_131304 (RefSeq)
	pax6b	ZDB-GENE-001031-1 (Zebrafish Model Organism Database) 60639 (Entrez Gene) pax6b (Alliance of Genome Resources)	Chr7			NP_571716 (RefSeq) NM_131641 (RefSeq)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.