Vertebrate Homology

• Source: Alliance of Genome Resources

Multiple Genome Viewer

Comparative GO Graph (mouse, human, rat, zebrafish)  

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences
human	CALM3	HGNC:1449 (HGNC) 808 (Entrez Gene) 114183 (OMIM) CALM3 (Alliance of Genome Resources)	Chr19 q13.32	Chr19:46601074-46610782 (+) GRCh38	familial hypertrophic cardiomyopathy long QT syndrome 16	P0DP25 (UniProt | EBI) NM_001329921 (RefSeq)
mouse	Calm3	MGI:103249 (MGI) 12315 (Entrez Gene) Gene Tree Calm3 (Alliance of Genome Resources)	Chr7 9.15 cM	Chr7:16649304-16657957 (-) GRCm39		12315 (NCBI Gene Model) P0DP28 (UniProt | EBI) NM_007590 (RefSeq)
rat	Calm1	RGD:2257 (Rat Genome Database) 24242 (Entrez Gene) Calm1 (Alliance of Genome Resources)	Chr6 q32			P0DP29 (UniProt | EBI) NM_031969 (RefSeq)
	Calm2	RGD:2258 (Rat Genome Database) 50663 (Entrez Gene) Calm2 (Alliance of Genome Resources)	Chr6 q12			P0DP30 (UniProt | EBI) NM_017326 (RefSeq)
	Calm3	RGD:2259 (Rat Genome Database) 24244 (Entrez Gene) Calm3 (Alliance of Genome Resources)	Chr1 q21			P0DP31 (UniProt | EBI) NM_012518 (RefSeq)
zebrafish	calm1a	ZDB-GENE-030131-8308 (Zebrafish Model Organism Database) 406660 (Entrez Gene) calm1a (Alliance of Genome Resources)	Chr17			NP_998516 (RefSeq) NM_213351 (RefSeq)
	calm1b	ZDB-GENE-030804-2 (Zebrafish Model Organism Database) 368217 (Entrez Gene) calm1b (Alliance of Genome Resources)	Chr20			NP_956376 (RefSeq) NM_200082 (RefSeq)
	calm2a	ZDB-GENE-030804-3 (Zebrafish Model Organism Database) 336121 (Entrez Gene) calm2a (Alliance of Genome Resources)	Chr13			NP_956290 (RefSeq) NM_199996 (RefSeq)
	calm2b	ZDB-GENE-020415-2 (Zebrafish Model Organism Database) 192322 (Entrez Gene) calm2b (Alliance of Genome Resources)	Chr12			NP_999901 (RefSeq) NM_214736 (RefSeq)
	calm3a	ZDB-GENE-030131-5590 (Zebrafish Model Organism Database) 327379 (Entrez Gene) calm3a (Alliance of Genome Resources)	Chr15			NP_892012 (RefSeq) NM_182967 (RefSeq)
	calm3b	ZDB-GENE-030131-527 (Zebrafish Model Organism Database) 321808 (Entrez Gene) calm3b (Alliance of Genome Resources)	Chr21			NP_955864 (RefSeq) NM_199570 (RefSeq)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.