Vertebrate Homology

• Source: Alliance of Genome Resources

Multiple Genome Viewer

Comparative GO Graph (mouse, human, rat, zebrafish)  

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences
human	RDH8	HGNC:14423 (HGNC) 50700 (Entrez Gene) 608575 (OMIM) RDH8 (Alliance of Genome Resources)	Chr19 p13.2	Chr19:10013249-10022279 (+) GRCh38		Q9NYR8 (UniProt | EBI) NM_015725 (RefSeq)
mouse	Rdh8	MGI:2685028 (MGI) 235033 (Entrez Gene) Gene Tree Rdh8 (Alliance of Genome Resources)	Chr9 7.64 cM	Chr9:20729799-20737413 (+) GRCm39		ENSMUSG00000053773 (Ensembl Gene Model) ENSMUSP00000067662 (Ensembl) ENSMUST00000066387 (Ensembl)
rat	Rdh8	RGD:1589829 (Rat Genome Database) 690953 (Entrez Gene) Rdh8 (Alliance of Genome Resources)	Chr8 q13			NP_001162065 (RefSeq) NM_001168593 (RefSeq)
zebrafish	rdh8a	ZDB-GENE-021115-3 (Zebrafish Model Organism Database) 280648 (Entrez Gene) rdh8a (Alliance of Genome Resources)	Chr3			NP_957001 (RefSeq) NM_200707 (RefSeq)
	rdh8b	ZDB-GENE-040426-1759 (Zebrafish Model Organism Database) 393761 (Entrez Gene) rdh8b (Alliance of Genome Resources)	Chr1			NP_957082 (RefSeq) NM_200788 (RefSeq)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.