Vertebrate Homology

• Source: Alliance of Genome Resources

Multiple Genome Viewer

Comparative GO Graph (mouse, human, rat, zebrafish)  

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences
human	SET	HGNC:10760 (HGNC) 6418 (Entrez Gene) 600960 (OMIM) SET (Alliance of Genome Resources)	Chr9 q34.11	Chr9:128683424-128696400 (+) GRCh38	autosomal dominant intellectual developmental disorder	Q01105 (UniProt | EBI) NM_001374326 (RefSeq)
	SETSIP	HGNC:42937 (HGNC) 646817 (Entrez Gene) SETSIP (Alliance of Genome Resources)	Chr1 p22.1	Chr1:92074533-92075411 (-) GRCh38		P0DME0 (UniProt | EBI) NM_001287737 (RefSeq)
mouse	Set	MGI:1860267 (MGI) 56086 (Entrez Gene) Gene Tree Set (Alliance of Genome Resources)	Chr2 21.09 cM	Chr2:29952074-29962589 (+) GRCm39		56086 (NCBI Gene Model) Q9EQU5 (UniProt | EBI) NM_001204875 (RefSeq)
rat	Setsip	RGD:1307467 (Rat Genome Database) 307947 (Entrez Gene) Setsip (Alliance of Genome Resources)	Chr19 q12			Q63945 (UniProt | EBI) NM_001012504 (RefSeq)
zebrafish	seta	ZDB-GENE-030131-2221 (Zebrafish Model Organism Database) 323501 (Entrez Gene) seta (Alliance of Genome Resources)	Chr8			NP_958883 (RefSeq) NM_201475 (RefSeq)
	setb	ZDB-GENE-030131-433 (Zebrafish Model Organism Database) 321714 (Entrez Gene) setb (Alliance of Genome Resources)	Chr21			NP_958876 (RefSeq) NM_201468 (RefSeq)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.