Vertebrate Homology

• Source: Alliance of Genome Resources

Multiple Genome Viewer

Comparative GO Graph (mouse, human, rat, zebrafish)  

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences
human	CSNK1E	HGNC:2453 (HGNC) 1454 (Entrez Gene) 600863 (OMIM) CSNK1E (Alliance of Genome Resources)	Chr22 q13.1	Chr22:38290691-38318084 (-) GRCh38	invasive ductal carcinoma	P49674 (UniProt | EBI) NM_001894 (RefSeq)
	TPTEP2-CSNK1E	HGNC:53829 (HGNC) 102800317 (Entrez Gene) TPTEP2-CSNK1E (Alliance of Genome Resources)	Chr22 q13.1	Chr22:38290691-38398915 (-) GRCh38		NP_001276841 (RefSeq) NM_001289912 (RefSeq)
mouse	Csnk1e	MGI:1351660 (MGI) 27373 (Entrez Gene) Gene Tree Csnk1e (Alliance of Genome Resources)	Chr15 37.71 cM	Chr15:79302056-79339767 (-) GRCm39		ENSMUSG00000022433 (Ensembl Gene Model) ENSMUSP00000113341 (Ensembl) ENSMUST00000117786 (Ensembl)
rat	Csnk1e	RGD:62045 (Rat Genome Database) 58822 (Entrez Gene) Csnk1e (Alliance of Genome Resources)	Chr7 q34			NP_113805 (RefSeq) NM_031617 (RefSeq)
zebrafish	csnk1e	ZDB-GENE-030131-7873 (Zebrafish Model Organism Database) 100006858 (Entrez Gene) csnk1e (Alliance of Genome Resources)	Chr12			NP_997912 (RefSeq) NM_212747 (RefSeq)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.