Vertebrate Homology

• Source: Alliance of Genome Resources

Multiple Genome Viewer

Comparative GO Graph (mouse, human, rat, zebrafish)  

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences
human	STIMATE	HGNC:30526 (HGNC) 375346 (Entrez Gene) 617189 (OMIM) STIMATE (Alliance of Genome Resources)	Chr3 p21.1	Chr3:52836219-52897548 (-) GRCh38		Q86TL2 (UniProt | EBI) NM_198563 (RefSeq)
	STIMATE-MUSTN1	HGNC:38834 (HGNC) 100526772 (Entrez Gene) STIMATE-MUSTN1 (Alliance of Genome Resources)	Chr	Chr3:52833121-52897562 (-) GRCh38		NP_001185903 (RefSeq) NM_001198974 (RefSeq)
mouse	Stimate	MGI:1921500 (MGI) 69179 (Entrez Gene) Gene Tree Stimate (Alliance of Genome Resources)	Chr14 19.09 cM	Chr14:30547547-30599167 (+) GRCm39		ENSMUSG00000006526 (Ensembl Gene Model) ENSMUSP00000006701 (Ensembl) ENSMUST00000006701 (Ensembl)
rat	Stimate	RGD:735152 (Rat Genome Database) 361110 (Entrez Gene) Stimate (Alliance of Genome Resources)	Chr16 p16			Q7TSW6 (UniProt | EBI) NM_198774 (RefSeq)
zebrafish	stimate	ZDB-GENE-040426-1198 (Zebrafish Model Organism Database) 393439 (Entrez Gene) stimate (Alliance of Genome Resources)	Chr11			NP_956761 (RefSeq) NM_200467 (RefSeq)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.