Vertebrate Homology

• Source: Alliance of Genome Resources

Multiple Genome Viewer

Comparative GO Graph (mouse, human, rat, zebrafish)  

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences
human	PAM16	HGNC:29679 (HGNC) 51025 (Entrez Gene) 614336 (OMIM) PAM16 (Alliance of Genome Resources)	Chr16 p13.3	Chr16:4331549-4355607 (-) GRCh38	spondylometaphyseal dysplasia Megarbane-Dagher-Melike type	Q9Y3D7 (UniProt | EBI) NM_016069 (RefSeq)
mouse	Pam16	MGI:1913699 (MGI) 66449 (Entrez Gene) Gene Tree Pam16 (Alliance of Genome Resources)	Chr16 2.45 cM	Chr16:4434330-4442810 (-) GRCm39		66449 (NCBI Gene Model) Q9CQV1 (UniProt | EBI) NM_025571 (RefSeq)
rat	Magmas-ps1	RGD:1564452 (Rat Genome Database) 287065 (Entrez Gene) Magmas-ps1 (Alliance of Genome Resources)	Chr10 q32.1			Q6EIX2 (UniProt | EBI)
	Pam16	RGD:1598163 (Rat Genome Database) 679907 (Entrez Gene) Pam16 (Alliance of Genome Resources)	Chr10 q12			NP_001093606 (RefSeq) NM_001100136 (RefSeq)
zebrafish	pam16	ZDB-GENE-040426-1776 (Zebrafish Model Organism Database) 393777 (Entrez Gene) pam16 (Alliance of Genome Resources)	Chr3			Q6PBL0 (UniProt | EBI) NM_200804 (RefSeq)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.