Vertebrate Homology

• Source: Alliance of Genome Resources

Multiple Genome Viewer

Comparative GO Graph (mouse, human, rat, zebrafish)  

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences
human	VTA1	HGNC:20954 (HGNC) 51534 (Entrez Gene) 610902 (OMIM) VTA1 (Alliance of Genome Resources)	Chr6 q24.1-q24.2	Chr6:142147162-142224685 (+) GRCh38		Q9NP79 (UniProt | EBI) NM_016485 (RefSeq)
mouse	Vta1	MGI:1913451 (MGI) 66201 (Entrez Gene) Gene Tree Vta1 (Alliance of Genome Resources)	Chr10 5.5 cM	Chr10:14531077-14581233 (-) GRCm39		66201 (NCBI Gene Model) Q9CR26 (UniProt | EBI) NM_001429340 (RefSeq)
rat	Vta1	RGD:1305031 (Rat Genome Database) 292640 (Entrez Gene) Vta1 (Alliance of Genome Resources)	Chr1 p13			NP_001385614 (RefSeq) NM_001025640 (RefSeq)
zebrafish	vta1	ZDB-GENE-040426-2154 (Zebrafish Model Organism Database) 406414 (Entrez Gene) vta1 (Alliance of Genome Resources)	Chr20			NP_998305 (RefSeq) NM_213140 (RefSeq)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.