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Vertebrate Homology
Source
Alliance of Genome Resources

Comparative GO Graph (mouse, human, rat, zebrafish)  
Alliance Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human HMGB2 HGNC:5000 (HGNC)
3148 (Entrez Gene)
163906 (OMIM)
HMGB2 (Alliance of Genome Resources)
Chr4 q34.1 Chr4:173331376-173334432 (-)
GRCh38
P26583 (UniProt | EBI)
NM_002129 (RefSeq)
mouse Hmgb2 MGI:96157 (MGI)
97165 (Entrez Gene)
Gene Tree
Hmgb2 (Alliance of Genome Resources)
Chr8 29.9 cM Chr8:57964941-57969033 (+)
GRCm39
ENSMUSG00000054717 (Ensembl Gene Model)
ENSMUSP00000065940 (Ensembl)
ENSMUST00000067925 (Ensembl)
rat Hmgb2 RGD:69291 (Rat Genome Database)
29395 (Entrez Gene)
Hmgb2 (Alliance of Genome Resources)
Chr16 p11 P52925 (UniProt | EBI)
NM_017187 (RefSeq)
Hmgb2-ps6 RGD:1559962 (Rat Genome Database)
498988 (Entrez Gene)
Hmgb2-ps6 (Alliance of Genome Resources)
Chr1 p12
Hmgb2l1 RGD:1564519 (Rat Genome Database)
498072 (Entrez Gene)
Hmgb2l1 (Alliance of Genome Resources)
Chr11 q12 NP_001316810 (RefSeq)
NM_001329881 (RefSeq)
Hmgb2l2 RGD:1561694 (Rat Genome Database)
498388 (Entrez Gene)
Hmgb2l2 (Alliance of Genome Resources)
Chr14 q21 XP_038948739 (RefSeq)
zebrafish hmgb2a ZDB-GENE-051120-126 (Zebrafish Model Organism Database)
641484 (Entrez Gene)
hmgb2a (Alliance of Genome Resources)
Chr1 NP_001032501 (RefSeq)
NM_001037424 (RefSeq)
hmgb2b ZDB-GENE-040912-122 (Zebrafish Model Organism Database)
447936 (Entrez Gene)
hmgb2b (Alliance of Genome Resources)
Chr23 NP_001004674 (RefSeq)
NM_001004674 (RefSeq)
Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
11/19/2024
MGI 6.24
The Jackson Laboratory