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Vertebrate Homology
Source
Alliance of Genome Resources

Comparative GO Graph (mouse, human, rat, zebrafish)  
Alliance Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human PCDHB14 HGNC:8685 (HGNC)
56122 (Entrez Gene)
606340 (OMIM)
PCDHB14 (Alliance of Genome Resources)
Chr5 q31.3 Chr5:141223343-141227759 (+)
GRCh38
Q9Y5E9 (UniProt | EBI)
NM_018934 (RefSeq)
mouse Pcdhb20 MGI:2136758 (MGI)
93891 (Entrez Gene)
Gene Tree
Pcdhb20 (Alliance of Genome Resources)
Chr18 19.51 cM Chr18:37637332-37640713 (+)
GRCm39
93891 (NCBI Gene Model)
NP_444375 (RefSeq)
NM_053145 (RefSeq)
rat Pcdhb20 RGD:1594228 (Rat Genome Database)
680203 (Entrez Gene)
Pcdhb20 (Alliance of Genome Resources)
Chr18 p11 NP_001102865 (RefSeq)
NM_001109395 (RefSeq)
zebrafish pcdh1g1 ZDB-GENE-050608-1 (Zebrafish Model Organism Database)
553983 (Entrez Gene)
pcdh1g1 (Alliance of Genome Resources)
Chr10 NP_001018640 (RefSeq)
NM_001020804 (RefSeq)
pcdh1g2 ZDB-GENE-050608-2 (Zebrafish Model Organism Database)
553986 (Entrez Gene)
pcdh1g2 (Alliance of Genome Resources)
Chr10 NP_001018872 (RefSeq)
NM_001023578 (RefSeq)
pcdh1g3 ZDB-GENE-050608-3 (Zebrafish Model Organism Database)
553987 (Entrez Gene)
pcdh1g3 (Alliance of Genome Resources)
Chr10 NP_001018871 (RefSeq)
NM_001023577 (RefSeq)
pcdh1g11 ZDB-GENE-050609-7 (Zebrafish Model Organism Database)
553999 (Entrez Gene)
pcdh1g11 (Alliance of Genome Resources)
Chr10 NP_001019282 (RefSeq)
NM_001024111 (RefSeq)
pcdh1g13 ZDB-GENE-050609-8 (Zebrafish Model Organism Database)
554000 (Entrez Gene)
pcdh1g13 (Alliance of Genome Resources)
Chr10 NM_001024112 (RefSeq)
pcdh1g14 ZDB-GENE-050609-9 (Zebrafish Model Organism Database)
554001 (Entrez Gene)
pcdh1g14 (Alliance of Genome Resources)
Chr10 NM_001024113 (RefSeq)
pcdh1g18 ZDB-GENE-050609-13 (Zebrafish Model Organism Database)
554005 (Entrez Gene)
pcdh1g18 (Alliance of Genome Resources)
Chr10 NP_001019288 (RefSeq)
NM_001024117 (RefSeq)
pcdh1gb2 ZDB-GENE-041118-19 (Zebrafish Model Organism Database)
503573 (Entrez Gene)
pcdh1gb2 (Alliance of Genome Resources)
Chr10 NP_001012676 (RefSeq)
NM_001012658 (RefSeq)
pcdh1gb9 ZDB-GENE-041118-18 (Zebrafish Model Organism Database)
553940 (Entrez Gene)
pcdh1gb9 (Alliance of Genome Resources)
Chr10 NP_001018614 (RefSeq)
NM_001020778 (RefSeq)
pcdh2g10 ZDB-GENE-050610-1 (Zebrafish Model Organism Database)
554058 (Entrez Gene)
pcdh2g10 (Alliance of Genome Resources)
Chr14 NP_001019354 (RefSeq)
NM_001024183 (RefSeq)
pcdh2g17 ZDB-GENE-050610-7 (Zebrafish Model Organism Database)
554064 (Entrez Gene)
pcdh2g17 (Alliance of Genome Resources)
Chr14 NP_001019360 (RefSeq)
NM_001024189 (RefSeq)
Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
11/19/2024
MGI 6.24
The Jackson Laboratory