Vertebrate Homology

• Source: Alliance of Genome Resources

Multiple Genome Viewer

Comparative GO Graph (mouse, human, rat, zebrafish)  

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences
human	SMARCAL1	HGNC:11102 (HGNC) 50485 (Entrez Gene) 606622 (OMIM) SMARCAL1 (Alliance of Genome Resources)	Chr2 q35	Chr2:216412383-216483053 (+) GRCh38	Schimke immuno-osseous dysplasia	Q9NZC9 (UniProt | EBI) NM_014140 (RefSeq)
mouse	Smarcal1	MGI:1859183 (MGI) 54380 (Entrez Gene) Gene Tree Smarcal1 (Alliance of Genome Resources)	Chr1 36.72 cM	Chr1:72622410-72672293 (+) GRCm39	Schimke immuno-osseous dysplasia	ENSMUSG00000039354 (Ensembl Gene Model) ENSMUSP00000047589 (Ensembl) ENSMUST00000047615 (Ensembl)
rat	Smarcal1	RGD:1306134 (Rat Genome Database) 316477 (Entrez Gene) Smarcal1 (Alliance of Genome Resources)	Chr9 q33			B4F769 (UniProt | EBI) NM_001108222 (RefSeq)
zebrafish	smarcal1	ZDB-GENE-041210-303 (Zebrafish Model Organism Database) 560412 (Entrez Gene) smarcal1 (Alliance of Genome Resources)	Chr9			B2ZFP3 (UniProt | EBI) NM_001127466 (RefSeq)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.