Vertebrate Homology

• Source: Alliance of Genome Resources

Multiple Genome Viewer

Comparative GO Graph (mouse, human, rat, zebrafish)  

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences
human	TRPA1	HGNC:497 (HGNC) 8989 (Entrez Gene) 604775 (OMIM) TRPA1 (Alliance of Genome Resources)	Chr8 q21.11	Chr8:72019917-72090010 (-) GRCh38	familial episodic pain syndrome 1	O75762 (UniProt | EBI) NM_007332 (RefSeq)
mouse	Trpa1	MGI:3522699 (MGI) 277328 (Entrez Gene) Gene Tree Trpa1 (Alliance of Genome Resources)	Chr1 4.5 cM	Chr1:14942872-14989086 (-) GRCm39		ENSMUSG00000032769 (Ensembl Gene Model) ENSMUSP00000043594 (Ensembl) ENSMUST00000041447 (Ensembl)
rat	Trpa1	RGD:1303284 (Rat Genome Database) 312896 (Entrez Gene) Trpa1 (Alliance of Genome Resources)	Chr5 q11			Q6RI86 (UniProt | EBI) NM_207608 (RefSeq)
zebrafish	trpa1a	ZDB-GENE-050105-6 (Zebrafish Model Organism Database) 474351 (Entrez Gene) trpa1a (Alliance of Genome Resources)	Chr2			NP_001007066 (RefSeq) NM_001007065 (RefSeq)
	trpa1b	ZDB-GENE-050106-1 (Zebrafish Model Organism Database) 474353 (Entrez Gene) trpa1b (Alliance of Genome Resources)	Chr24			NP_001007067 (RefSeq) NM_001007066 (RefSeq)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.