Vertebrate Homology

• Source: Alliance of Genome Resources

Multiple Genome Viewer

Comparative GO Graph (mouse, human, rat, zebrafish)  

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences
human	CAPN2	HGNC:1479 (HGNC) 824 (Entrez Gene) 114230 (OMIM) CAPN2 (Alliance of Genome Resources)	Chr1 q41	Chr1:223701593-223776018 (+) GRCh38		P17655 (UniProt | EBI) NM_001748 (RefSeq)
mouse	Capn2	MGI:88264 (MGI) 12334 (Entrez Gene) Gene Tree Capn2 (Alliance of Genome Resources)	Chr1 84.93 cM	Chr1:182294825-182345173 (-) GRCm39		ENSMUSG00000026509 (Ensembl Gene Model) ENSMUSP00000068895 (Ensembl) ENSMUST00000068505 (Ensembl)
rat	Capn2	RGD:2268 (Rat Genome Database) 29154 (Entrez Gene) Capn2 (Alliance of Genome Resources)	Chr13 q26			Q07009 (UniProt | EBI) NM_017116 (RefSeq)
zebrafish	capn2a	ZDB-GENE-050320-69 (Zebrafish Model Organism Database) 541374 (Entrez Gene) capn2a (Alliance of Genome Resources)	Chr13			NP_001013519 (RefSeq) NM_001013501 (RefSeq)
	capn2b	ZDB-GENE-050522-84 (Zebrafish Model Organism Database) 563053 (Entrez Gene) capn2b (Alliance of Genome Resources)	Chr22			NP_001018177 (RefSeq) NM_001018227 (RefSeq)
	capn2l	ZDB-GENE-050417-341 (Zebrafish Model Organism Database) 445091 (Entrez Gene) capn2l (Alliance of Genome Resources)	Chr22			NP_001003485 (RefSeq) NM_001003485 (RefSeq)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.