Vertebrate Homology

• Source: Alliance of Genome Resources

Multiple Genome Viewer

Comparative GO Graph (mouse, human, rat, zebrafish)  

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences
human	CACNA2D2	HGNC:1400 (HGNC) 9254 (Entrez Gene) 607082 (OMIM) CACNA2D2 (Alliance of Genome Resources)	Chr3 p21.31	Chr3:50362613-50504244 (-) GRCh38		Q9NY47 (UniProt | EBI) NM_001174051 (RefSeq)
mouse	Cacna2d2	MGI:1929813 (MGI) 56808 (Entrez Gene) Gene Tree Cacna2d2 (Alliance of Genome Resources)	Chr9 58.02 cM	Chr9:107276948-107406545 (+) GRCm39	epilepsy	56808 (NCBI Gene Model) Q6PHS9 (UniProt | EBI) NM_001174047 (RefSeq)
rat	Cacna2d2	RGD:631360 (Rat Genome Database) 300992 (Entrez Gene) Cacna2d2 (Alliance of Genome Resources)	Chr8 q32			Q8CFG6 (UniProt | EBI) NM_175592 (RefSeq)
zebrafish	cacna2d2a	ZDB-GENE-050320-71 (Zebrafish Model Organism Database) 541376 (Entrez Gene) cacna2d2a (Alliance of Genome Resources)	Chr6			NP_001013521 (RefSeq) NM_001013503 (RefSeq)
	cacna2d2b	ZDB-GENE-060503-99 (Zebrafish Model Organism Database) 568759 (Entrez Gene) cacna2d2b (Alliance of Genome Resources)	Chr22			NP_001082889 (RefSeq) NM_001089420 (RefSeq)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.