Vertebrate Homology

• Source: Alliance of Genome Resources

Multiple Genome Viewer

Comparative GO Graph (mouse, human, rat, zebrafish)  

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences
human	SP100	HGNC:11206 (HGNC) 6672 (Entrez Gene) 604585 (OMIM) SP100 (Alliance of Genome Resources)	Chr2 q37.1	Chr2:230415942-230545606 (+) GRCh38		P23497 (UniProt | EBI) NM_003113 (RefSeq)
mouse	Sp100	MGI:109561 (MGI) 20684 (Entrez Gene) Gene Tree Sp100 (Alliance of Genome Resources)	Chr1 43.6 cM	Chr1:85577709-85637719 (+) GRCm39		ENSMUSG00000026222 (Ensembl Gene Model) ENSMUSP00000066399 (Ensembl) ENSMUST00000066427 (Ensembl)
rat	Sp100	RGD:1359550 (Rat Genome Database) 363269 (Entrez Gene) Sp100 (Alliance of Genome Resources)	Chr9 q35			NP_001014242 (RefSeq) NM_001014220 (RefSeq)
zebrafish	sp100.1	ZDB-GENE-141212-239 (Zebrafish Model Organism Database) 796843 (Entrez Gene) sp100.1 (Alliance of Genome Resources)	Chr3			XP_001337239 (RefSeq)
	sp100.3	ZDB-GENE-130530-997 (Zebrafish Model Organism Database) 555649 (Entrez Gene) sp100.3 (Alliance of Genome Resources)	Chr3			XP_021329292 (RefSeq)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.