Vertebrate Homology

• Source: Alliance of Genome Resources

Multiple Genome Viewer

Comparative GO Graph (mouse, human, rat, zebrafish)  

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences
human	PCDHGA9	HGNC:8707 (HGNC) 56107 (Entrez Gene) 606296 (OMIM) PCDHGA9 (Alliance of Genome Resources)	Chr5 q31.3	Chr5:141402778-141512975 (+) GRCh38		Q9Y5G4 (UniProt | EBI) NM_032089 (RefSeq)
mouse	Pcdhga9	MGI:1935226 (MGI) 93717 (Entrez Gene) Gene Tree Pcdhga9 (Alliance of Genome Resources)	Chr18 19.6 cM	Chr18:37869989-37974916 (+) GRCm39		93717 (NCBI Gene Model) NP_291070 (RefSeq) NM_033592 (RefSeq)
rat	Pcdhga9	RGD:620729 (Rat Genome Database) 252895 (Entrez Gene) Pcdhga9 (Alliance of Genome Resources)	Chr18 p11			NP_001032235 (RefSeq) NM_001037158 (RefSeq)
zebrafish	pcdh1g32	ZDB-GENE-050609-25 (Zebrafish Model Organism Database) 554016 (Entrez Gene) pcdh1g32 (Alliance of Genome Resources)	Chr10			NP_001019299 (RefSeq) NM_001024128 (RefSeq)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.