Vertebrate Homology

• Source: Alliance of Genome Resources

Multiple Genome Viewer

Comparative GO Graph (mouse, zebrafish)  

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences
mouse	Tgtp1	MGI:98734 (MGI) 21822 (Entrez Gene) Gene Tree Tgtp1 (Alliance of Genome Resources)	Chr11 28.98 cM	Chr11:48876156-48883073 (-) GRCm39		21822 (NCBI Gene Model) Q62293 (UniProt | EBI) NM_011579 (RefSeq)
zebrafish	irgf1	ZDB-GENE-051212-5 (Zebrafish Model Organism Database) 100137101 (Entrez Gene) irgf1 (Alliance of Genome Resources)	Chr19			NP_001307352 (RefSeq) NM_001320423 (RefSeq)
	irgf3	ZDB-GENE-051212-6 (Zebrafish Model Organism Database) 797731 (Entrez Gene) irgf3 (Alliance of Genome Resources)	Chr19			XP_001338197 (RefSeq)
	si:ch73-171o20.1	ZDB-GENE-140106-80 (Zebrafish Model Organism Database) 563833 (Entrez Gene) si:ch73-171o20.1 (Alliance of Genome Resources)	Chr19			XP_017207834 (RefSeq)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.