Vertebrate Homology

• Source: Alliance of Genome Resources

Multiple Genome Viewer

Comparative GO Graph (mouse, human, rat, zebrafish)  

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences
human	TRIM27	HGNC:9975 (HGNC) 5987 (Entrez Gene) 602165 (OMIM) TRIM27 (Alliance of Genome Resources)	Chr6 p22.1	Chr6:28903002-28923988 (-) GRCh38		P14373 (UniProt | EBI) NM_030950 (RefSeq)
mouse	Trim27	MGI:97904 (MGI) 19720 (Entrez Gene) Gene Tree Trim27 (Alliance of Genome Resources)	Chr13 7.67 cM	Chr13:21363615-21378894 (+) GRCm39		ENSMUSG00000021326 (Ensembl Gene Model) ENSMUSP00000021761 (Ensembl) ENSMUST00000021761 (Ensembl)
rat	Trim27	RGD:1310105 (Rat Genome Database) 291171 (Entrez Gene) Trim27 (Alliance of Genome Resources)	Chr17 q11			NP_001128446 (RefSeq) NM_001134974 (RefSeq)
zebrafish	btr04	ZDB-GENE-060825-109 (Zebrafish Model Organism Database) 565512 (Entrez Gene) btr04 (Alliance of Genome Resources)	Chr7			XP_017212468 (RefSeq) NM_001077168 (RefSeq)
	btr20	ZDB-GENE-060421-3419 (Zebrafish Model Organism Database) 678596 (Entrez Gene) btr20 (Alliance of Genome Resources)	Chr19			NP_001410635 (RefSeq) NM_001423706 (RefSeq)
	btr21	ZDB-GENE-081031-80 (Zebrafish Model Organism Database) 100330973 (Entrez Gene) btr21 (Alliance of Genome Resources)	Chr19
	btr25	ZDB-GENE-070705-377 (Zebrafish Model Organism Database) 571141 (Entrez Gene) btr25 (Alliance of Genome Resources)	Chr19			NP_001093511 (RefSeq) NM_001386812 (RefSeq)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.