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Vertebrate Homology
Source
Alliance of Genome Resources

Comparative GO Graph (mouse, human, rat, zebrafish)  
Alliance Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human TRIM6-TRIM34 HGNC:33440 (HGNC)
445372 (Entrez Gene)
TRIM6-TRIM34 (Alliance of Genome Resources)
Chr11 p15.4 Chr11:5596637-5644398 (+)
GRCh38
NP_001003819 (RefSeq)
NM_001003819 (RefSeq)
TRIM34 HGNC:10063 (HGNC)
53840 (Entrez Gene)
605684 (OMIM)
TRIM34 (Alliance of Genome Resources)
Chr11 p15.4 Chr11:5619764-5644398 (+)
GRCh38
Q9BYJ4 (UniProt | EBI)
NM_130390 (RefSeq)
mouse Trim34b MGI:4821264 (MGI)
434218 (Entrez Gene)
Gene Tree
Trim34b (Alliance of Genome Resources)
Chr7 55.69 cM Chr7:103978678-103986116 (+)
GRCm39
ENSMUSG00000090215 (Ensembl Gene Model)
ENSMUSP00000102460 (Ensembl)
ENSMUST00000106847 (Ensembl)
rat Trim34 RGD:7240857 (Rat Genome Database)
101241893 (Entrez Gene)
Trim34 (Alliance of Genome Resources)
Chr1 NP_001263420 (RefSeq)
NM_001276491 (RefSeq)
zebrafish si:ch73-364h19.2 ZDB-GENE-131119-21 (Zebrafish Model Organism Database)
100537438 (Entrez Gene)
si:ch73-364h19.2 (Alliance of Genome Resources)
ChrUN XP_003198243 (RefSeq)
si:ch211-114c12.5 ZDB-GENE-060526-13 (Zebrafish Model Organism Database)
565476 (Entrez Gene)
si:ch211-114c12.5 (Alliance of Genome Resources)
Chr5 XP_021332022 (RefSeq)
si:ch211-120g10.1 ZDB-GENE-130531-56 (Zebrafish Model Organism Database)
556805 (Entrez Gene)
si:ch211-120g10.1 (Alliance of Genome Resources)
Chr3 XP_684799 (RefSeq)
si:dkey-18p12.4 ZDB-GENE-070912-408 (Zebrafish Model Organism Database)
794946 (Entrez Gene)
si:dkey-18p12.4 (Alliance of Genome Resources)
Chr9 NP_001116179 (RefSeq)
NM_001122707 (RefSeq)
si:dkey-219e21.2 ZDB-GENE-141215-26 (Zebrafish Model Organism Database)
797371 (Entrez Gene)
si:dkey-219e21.2 (Alliance of Genome Resources)
Chr12 XP_001337843 (RefSeq)
zgc:194990 ZDB-GENE-081022-171 (Zebrafish Model Organism Database)
568410 (Entrez Gene)
zgc:194990 (Alliance of Genome Resources)
Chr8 NP_001124262 (RefSeq)
NM_001130790 (RefSeq)
Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
11/19/2024
MGI 6.24
The Jackson Laboratory