Vertebrate Homology

• Source: Alliance of Genome Resources

Multiple Genome Viewer

Comparative GO Graph (mouse, human, rat, zebrafish)  

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences
human	MMP11	HGNC:7157 (HGNC) 4320 (Entrez Gene) 185261 (OMIM) MMP11 (Alliance of Genome Resources)	Chr22 q11.23	Chr22:23768226-23784316 (+) GRCh38		P24347 (UniProt | EBI) NM_005940 (RefSeq)
mouse	Mmp11	MGI:97008 (MGI) 17385 (Entrez Gene) Gene Tree Mmp11 (Alliance of Genome Resources)	Chr10 38.62 cM	Chr10:75759056-75768336 (-) GRCm39		17385 (NCBI Gene Model) Q02853 (UniProt | EBI) NM_008606 (RefSeq)
rat	Mmp11	RGD:3099 (Rat Genome Database) 25481 (Entrez Gene) Mmp11 (Alliance of Genome Resources)	Chr20 p12			Q499S5 (UniProt | EBI) NM_012980 (RefSeq)
zebrafish	mmp11a	ZDB-GENE-070817-3 (Zebrafish Model Organism Database) 563753 (Entrez Gene) mmp11a (Alliance of Genome Resources)	Chr8			XP_021334138 (RefSeq)
	mmp11b	ZDB-GENE-070817-2 (Zebrafish Model Organism Database) 565793 (Entrez Gene) mmp11b (Alliance of Genome Resources)	Chr21			XP_694153 (RefSeq)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.