Vertebrate Homology

• Source: Alliance of Genome Resources

Multiple Genome Viewer

Comparative GO Graph (mouse, human, rat, zebrafish)  

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences
human	CXCL1	HGNC:4602 (HGNC) 2919 (Entrez Gene) 155730 (OMIM) CXCL1 (Alliance of Genome Resources)	Chr4 q13.3	Chr4:73869393-73871308 (+) GRCh38		P09341 (UniProt | EBI) NM_001511 (RefSeq)
	CXCL2	HGNC:4603 (HGNC) 2920 (Entrez Gene) 139110 (OMIM) CXCL2 (Alliance of Genome Resources)	Chr4 q13.3	Chr4:74097040-74099196 (-) GRCh38		P19875 (UniProt | EBI) NM_002089 (RefSeq)
	CXCL3	HGNC:4604 (HGNC) 2921 (Entrez Gene) 139111 (OMIM) CXCL3 (Alliance of Genome Resources)	Chr4 q13.3	Chr4:74036589-74038807 (-) GRCh38		P19876 (UniProt | EBI) NM_002090 (RefSeq)
mouse	Cxcl3	MGI:3037818 (MGI) 330122 (Entrez Gene) Gene Tree Cxcl3 (Alliance of Genome Resources)	Chr5 44.78 cM	Chr5:90933960-90935952 (+) GRCm39		330122 (NCBI Gene Model) Q6W5C0 (UniProt | EBI) NM_203320 (RefSeq)
rat	Cxcl3	RGD:621812 (Rat Genome Database) 171551 (Entrez Gene) Cxcl3 (Alliance of Genome Resources)	Chr14 p22			Q10746 (UniProt | EBI) NM_138522 (RefSeq)
zebrafish	cxcl8a	ZDB-GENE-081104-317 (Zebrafish Model Organism Database) 100002946 (Entrez Gene) cxcl8a (Alliance of Genome Resources)	Chr1			XP_001342606 (RefSeq)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.